Journal Information Journal ID ( pmc ): Plos Comput Biol ISSN: 1553734X Publisher: Plos Article Information © 2005 Quesneville et al. Accepted Day: 30 Month: 6 Year: 2005 Received Day: 11 Month: 5 Year: 2005 pub publication date: Day: 29 Month: 7 Year: 2005 Volume: 1 ID: 1185648 PubMed Id: 16110336 Combined Evidence Annotation of Transposable Elements in Genome Sequences. Hadi Quesneville , *a Casey M. Bergman , b Olivier Andrieu , a Delphine Autard , a Danielle Nouaud , a Michael Ashburner , b Dominique Anxolabehere . a a Laboratoire Dynamique du Génome et Evolution, Institut Jacques Monod, Paris, France b Department of Genetics, University of Cambridge, Cambridge, United Kingdom * To whom correspondence should be addressed. Email: hq@ccr.jussieu.fr Abstract Transposable elements (TEs) are mobile,...in the genus Drosophila. Introduction Transposable elements (TEs) are mobile,...of TE biology. One way ... gene models. Results Evaluation of Methods The first step ...for TE detection. Methods for the Annotation of Known TE Families To allow direct ...MATCHER. Footnotes Competing interests. The authors have declared that no competing interests exist. Author contributions. H. Quesneville, C. M. Bergman, M. Ashburner, and D. Anxolabehere conceived and designed the experiments. H. Quesneville, C. M. Bergman, and O. Andrieu performed the experiments. H. Quesneville, C. M. Bergman, O. Andrieu, D. Autard, and D. Nouaud analyzed the data. H. Quesneville, C. M. Bergman, O. Andrieu, D. Autard, and M. Ashburner contributed reagents/materials/analysis tools. H. Quesneville and C. M. Bergman wrote the paper. Citation: Quesneville H, Bergman CM, Andrieu O, Autard D, Nouaud D, et al. (2005) Combined evidence annotation of transposable elements in genome sequences. PLoS Comp Biol 1(2): e22. Acknowledgments We thank ...S. Russell. References Abbreviations BDGP Bekerley Drosophila Project Figures and Tables [Figure ID: ] Figure 1. Schematic of Our TE Annotation Pipeline