1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40
|
SEQ homo_sapiens 10 188847 225953 1 (chr_length=135534747)
SEQ ancestral_sequences Ancestor_494_520201 1 37347 -1 (chr_length=37347)
SEQ pan_troglodytes 10 198244 235417 1 (chr_length=135001995)
SEQ ancestral_sequences Ancestor_494_520203 1 37275 -1 (chr_length=37275)
SEQ gorilla_gorilla 10 106728 147755 1 (chr_length=148046649)
SEQ ancestral_sequences Ancestor_494_520195 1 34222 -1 (chr_length=34222)
SEQ pongo_pygmaeus 10 130064 165318 1 (chr_length=133410057)
SEQ ancestral_sequences Ancestor_494_520196 1 34149 -1 (chr_length=34149)
SEQ macaca_mulatta 9 103227 138335 1 (chr_length=133323859)
SEQ ancestral_sequences Ancestor_494_520194 1 32719 -1 (chr_length=32719)
SEQ callithrix_jacchus GL286397.1 712176 754122 1 (chr_length=1361745)
SEQ ancestral_sequences Ancestor_494_520202 1 22929 -1 (chr_length=22929)
SEQ mus_musculus 13 9734693 9757593 -1 (chr_length=120284312)
SEQ ancestral_sequences Ancestor_494_520198 1 20379 -1 (chr_length=20379)
SEQ rattus_norvegicus 17 71302947 71330922 1 (chr_length=97296363)
SEQ ancestral_sequences Ancestor_494_520197 1 31128 -1 (chr_length=31128)
SEQ canis_familiaris 2 37420124 37466229 -1 (chr_length=88410189)
SEQ ancestral_sequences Ancestor_494_520200 1 33496 -1 (chr_length=33496)
SEQ equus_caballus 29 33589493 33621743 -1 (chr_length=33672925)
SEQ ancestral_sequences Ancestor_494_520199 1 31912 -1 (chr_length=31912)
SEQ sus_scrofa 10 64747189 64800043 1 (chr_length=66741929)
TREE (((((((Hsap_10_188847_225953[+]:0.0067,Ptro_10_198244_235417[+]:0.0067)Aseq_Ancestor_494_520201_1_37347[-]:0.0022,Ggor_10_106728_147755[+]:0.0088)Aseq_Ancestor_494_520203_1_37275[-]:0.0097,Ppyg_10_130064_165318[+]:0.0183)Aseq_Ancestor_494_520195_1_34222[-]:0.0143,Mmul_9_103227_138335[+]:0.0375)Aseq_Ancestor_494_520196_1_34149[-]:0.0220,Cjac_GL286397.1_712176_754122[+]:0.0661)Aseq_Ancestor_494_520194_1_32719[-]:0.0891,(Mmus_13_9734693_9757593[-]:0.0845,Rnor_17_71302947_71330922[+]:0.0916)Aseq_Ancestor_494_520198_1_20379[-]:0.2720)Aseq_Ancestor_494_520202_1_22929[-]:0.0206,((Ecab_29_33589493_33621743[-]:0.1094,Cfam_2_37420124_37466229[-]:0.1523)Aseq_Ancestor_494_520200_1_33496[-]:0.0107,Sscr_10_64747189_64800043[+]:0.0992)Aseq_Ancestor_494_520199_1_31912[-]:0.0329)Aseq_Ancestor_494_520197_1_31128[-]:0.0000;
DATA
CCCCCCCCCCCCCCCCCCCCC
TTTTTTTTTTTTTTTTTTTTT
CCCCCCCCCCCCCCCCCCCCT
AAAAAAAAAAAAAAAAAAAAA
CCCCCCCCCCCCTTTCCCCCC
AAAAAAAAAAAAAAAAAAAAG
TTTTTTTTTTTTTTTTCTTTT
TTTTTTTTTTTTTTTTTTTTT
AAAAAAAAAAAAAAAAGAAAA
GGGGGGGGGGGTTTTTTTTTT
GGGGGGGGGGGGGGGGGGGGG
AAAAAAAAAAAAGGGAAAAAA
AAAAAAAAAAAAAAAAGAAAA
GGGGGGGGGGGGGGGGGGGGG
AAAAAAAAAAAAAAAAAAAAA
------------CCC------ |
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